| 1 | | Autonomous University of Queretaro | — | Physics and Astronomy | 77 | 24,297 | 270 | 366 |
| 2 | | Autonomous University of Queretaro | — | Agricultural and Biological Sciences | 54 | 12,014 | 154 | 310 |
| 3 | | Instituto Tecnológico de Querétaro | — | Biochemistry, Genetics and Molecular Biology | 51 | 7,552 | 103 | 451 |
| 4 | | Autonomous University of Queretaro | — | Nursing | 50 | 7,946 | 123 | 162 |
| 5 | | Autonomous University of Queretaro | — | Medicine | 49 | 7,898 | 165 | 311 |
| 6 | | Autonomous University of Queretaro | — | Neuroscience | 46 | 6,956 | 81 | 172 |
| 7 | | Autonomous University of Queretaro | — | Engineering | 45 | 6,982 | 152 | 266 |
| 8 | | Instituto Tecnológico de Querétaro | — | Materials Science | 44 | 6,198 | 135 | 272 |
| 9 | | Instituto Tecnológico de Querétaro | — | Materials Science | 43 | 6,995 | 118 | 198 |
| 10 | | Autonomous University of Queretaro | — | Nursing | 43 | 6,621 | 151 | 295 |
| 11 | | Autonomous University of Queretaro | — | Physics and Astronomy | 43 | 5,650 | 112 | 160 |
| 12 | | Autonomous University of Queretaro | — | Immunology and Microbiology | 43 | 5,078 | 69 | 99 |
| 13 | | Autonomous University of Queretaro | — | Agricultural and Biological Sciences | 42 | 6,507 | 137 | 263 |
| 14 | | Autonomous University of Queretaro | — | Engineering | 42 | 6,405 | 141 | 268 |
| 15 | | Autonomous University of Queretaro | — | Medicine | 40 | 8,047 | 75 | 217 |
| 16 | | Autonomous University of Queretaro | — | Environmental Science | 40 | 5,868 | 120 | 221 |
| 17 | | Autonomous University of Queretaro | — | Agricultural and Biological Sciences | 40 | 5,345 | 106 | 214 |
| 18 | | Autonomous University of Queretaro | — | Earth and Planetary Sciences | 39 | 3,941 | 91 | 228 |
| 19 | | Autonomous University of Queretaro | — | Engineering | 38 | 5,687 | 156 | 298 |
| 20 | | Autonomous University of Queretaro | — | Medicine | 38 | 4,534 | 71 | 99 |
| 21 | | Autonomous University of Queretaro | — | Medicine | 38 | 3,702 | 80 | 146 |
| 22 | | Autonomous University of Queretaro | — | Energy | 37 | 4,082 | 100 | 203 |
| 23 | | Autonomous University of Queretaro | — | Neuroscience | 36 | 5,127 | 75 | 226 |
| 24 | | Autonomous University of Queretaro | — | Physics and Astronomy | 36 | 3,917 | 60 | 475 |
| 25 | | Autonomous University of Queretaro | — | Engineering | 35 | 4,510 | 136 | 271 |
| 26 | | Autonomous University of Queretaro | — | Medicine | 35 | 4,238 | 82 | 154 |
| 27 | | Autonomous University of Queretaro | — | Nursing | 35 | 4,223 | 59 | 128 |
| 28 | | Instituto Tecnológico de Querétaro | — | Materials Science | 35 | 3,891 | 68 | 116 |
| 29 | | Autonomous University of Queretaro | — | Psychology | 33 | 3,860 | 91 | 140 |
| 30 | | Instituto Tecnológico de Querétaro | — | Materials Science | 33 | 3,530 | 62 | 108 |
| 31 | | Autonomous University of Queretaro | — | Nursing | 33 | 3,061 | 80 | 140 |
| 32 | | Autonomous University of Queretaro | — | Materials Science | 33 | 2,723 | 55 | 70 |
| 33 | | Instituto Tecnológico de Querétaro | — | Engineering | 32 | 5,395 | 34 | 38 |
| 34 | | Autonomous University of Queretaro | — | Engineering | 32 | 3,945 | 102 | 264 |
| 35 | | Autonomous University of Queretaro | — | Physics and Astronomy | 32 | 3,895 | 105 | 232 |
| 36 | | Autonomous University of Queretaro | — | Engineering | 32 | 3,877 | 69 | 136 |
| 37 | | Autonomous University of Queretaro | — | Neuroscience | 32 | 3,595 | 93 | 176 |
| 38 | | Autonomous University of Queretaro | — | Materials Science | 32 | 3,001 | 77 | 162 |
| 39 | | Autonomous University of Queretaro | — | Biochemistry, Genetics and Molecular Biology | 31 | 6,218 | 44 | 83 |
| 40 | | Autonomous University of Queretaro | — | Neuroscience | 31 | 4,001 | 79 | 132 |
| 41 | | Autonomous University of Queretaro | — | Engineering | 31 | 3,369 | 75 | 153 |
| 42 | | Autonomous University of Queretaro | — | Nursing | 31 | 2,969 | 61 | 99 |
| 43 | | Autonomous University of Queretaro | — | Materials Science | 31 | 2,877 | 60 | 105 |
| 44 | | Autonomous University of Queretaro | — | Medicine | 31 | 2,659 | 47 | 69 |
| 45 | | Autonomous University of Queretaro | — | Immunology and Microbiology | 31 | 2,620 | 65 | 131 |
| 46 | | Autonomous University of Queretaro | — | Nursing | 30 | 3,713 | 51 | 99 |
| 47 | | Autonomous University of Queretaro | — | Medicine | 30 | 2,841 | 58 | 100 |
| 48 | | Autonomous University of Queretaro | — | Biochemistry, Genetics and Molecular Biology | 30 | 2,690 | 80 | 180 |
| 49 | | Autonomous University of Queretaro | — | Earth and Planetary Sciences | 29 | 3,461 | 42 | 134 |
| 50 | | Autonomous University of Queretaro | — | Medicine | 29 | 3,351 | 50 | 76 |